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| Position | Top player | Team ranking | Top prospect | Organizational ranking | Overall ranking |
|---|---|---|---|---|---|
| Catchers | Matt Giardina | 7th | Paul Oulton | Tied for 9th | 7th |
| First Basemen | John Bramante | 19th | Phil Peters | Tied for 22nd | 22nd |
| Second Basemen | Vince Walker | 2nd | Benito Carrasco | 17th | 2nd |
| Third Basemen | 28th | Francisco Valdez | 17th | 28th | |
| Shortstops | Fernando Puente | 8th | Jonathon Pendergrass | 14th | 8th |
| Left Fielders | 28th | Walt Rae | 26th | 28th | |
| Center Fielders | Dan Nieman | 19th | Josiah Felton | 24th | 19th |
| Right Fielders | Adam Rufer | 25th | Victor Vivanco | 28th | 27th |
| Starting Pitchers | Justin Jenks | 10th | Cory Bossert | 13th | 11th |
| Relievers | Nick Cockrell | 3rd | Alfredo Mora | 26th | 4th |
| Closers | Nick Cockrell | 3rd | Scott Bertram | Tied for 6th | 3rd |
