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| Position | Top player | Team ranking | Top prospect | Organizational ranking | Overall ranking |
|---|---|---|---|---|---|
| Catchers | Juan Araque | Tied for 8th | Xiao-mei Lum | 14th | 8th |
| First Basemen | Bobby Banuelos | 19th | Josh Wheeler | 27th | 22nd |
| Second Basemen | Xavier Ray | 12th | Eduardo Gomez | 13th | 14th |
| Third Basemen | Jens van den Heuvel | 23rd | Gavin Lawson | 27th | 26th |
| Shortstops | Wonus Hagner | 2nd | Mike Young | 6th | 2nd |
| Left Fielders | Luis Gallardo | 5th | Mark Faught | 11th | 5th |
| Center Fielders | Chad Gould | 26th | Tim Hearn | Tied for 27th | 27th |
| Right Fielders | Ross Dobesh | 24th | Mitch Delagrange | 17th | 24th |
| Starting Pitchers | Mike Ortner | 15th | Jose Cedano | 3rd | 10th |
| Relievers | Noel Belcher | 6th | Cameron Calder | 8th | 4th |
| Closers | Willie Arredondo | 26th | Matt Maxfield | 2nd | 17th |
