| Monday, November 28th, 2016 |
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| RF Eduardo Otero received a 1-year contract through automatic renewal worth a total of $500,000. | | 3B Bob Hennessey received a 1-year contract through automatic renewal worth a total of $500,000. | | SP Bob Smith received a 1-year contract through automatic renewal worth a total of $500,000. | | CL Vasco Amore received a 1-year contract through automatic renewal worth a total of $500,000. | | 1B D.J. Richardson received a 1-year contract through automatic renewal worth a total of $800,000. | | RF Dwayne Hatcher received a 1-year contract through automatic renewal worth a total of $500,000. | | C Yoshida Hayakawa received a 1-year contract through automatic renewal worth a total of $500,000. | | MR Pat Short received a 1-year contract through automatic renewal worth a total of $500,000. | | CL Carlos Núñes received a 1-year contract through automatic renewal worth a total of $500,000. | | C Seitaro Uenohara received a 1-year contract through automatic renewal worth a total of $600,000. | | SP Toshiki Koda received a 1-year contract through automatic renewal worth a total of $2,000,000. | | 3B John Jones received a 1-year contract through automatic renewal worth a total of $500,000. | | LF Osamu Ito received a 1-year contract through automatic renewal worth a total of $500,000. | | RF Jack Watson received a 1-year contract through automatic renewal worth a total of $500,000. | | SP Jerome Burnett becomes a free-agent. | | MR Martin Ward becomes a free-agent. | | MR Patrick Jenkins becomes a free-agent. |
| Friday, November 25th, 2016 |
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| RF Mike Bergeron received a 1-year contract through arbitration worth a total of $11,156,250. | | SP William Nolan received a 1-year contract through arbitration worth a total of $2,400,000. | | SP Mike Miller received a 1-year contract through arbitration worth a total of $1,500,000. | | MR Dave Goodwin received a 1-year contract through arbitration worth a total of $800,000. | | 3B Manuel Sánchez received a 1-year contract through arbitration worth a total of $800,000. | | SS Clement Milford received a 1-year contract through arbitration worth a total of $800,000. | | CL Claude Howard received a 1-year contract through arbitration worth a total of $2,750,000. | | MR José López received a 1-year contract through arbitration worth a total of $800,000. | | LF Andrew Padgett received a 1-year contract through arbitration worth a total of $2,400,000. |
| Wednesday, November 23rd, 2016 |
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| Signed Will Harris to a minor league contract with a signing bonus of $200,000. |
| Monday, November 21st, 2016 |
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| Signed free agent SP Connor Minihan to a minor league contract. | | Signed free agent C Hokichi Aoyama to a minor league contract. |
| Sunday, November 20th, 2016 |
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| Signed Randy Thrasher to a minor league contract with a signing bonus of $200,000. |
| Thursday, November 17th, 2016 |
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| Signed Walt Hogan to a minor league contract with a signing bonus of $130,000. |
| Wednesday, November 16th, 2016 |
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| Signed Tesema Kibwana to a minor league contract with a signing bonus of $170,000. |
| Monday, November 14th, 2016 |
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| Signed team doctor Marvin Ryan to a 5-year, $576,000 per year contract. |
| Friday, November 11th, 2016 |
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| Signed Takashi Fujii to a minor league contract with a signing bonus of $830,000. |
| Thursday, November 10th, 2016 |
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| Signed SP Jake Nelson to a 4-year contract extension worth a total of $24,000,000. |
| Wednesday, November 9th, 2016 |
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| Signed Akira Kato to a minor league contract with a signing bonus of $810,000. |
| Monday, November 7th, 2016 |
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| Drafted SP Takashi Fujii in the 2016 first-year player draft (Round 1, Pick 22, 22nd overall pick). | | Drafted 2B Akira Kato in the 2016 first-year player draft (Round 1, Pick 23, 23rd overall pick). | | Drafted CF Will Harris in the 2016 first-year player draft (Round 2, Pick 21, 48th overall pick). | | Drafted CL Walt Hogan in the 2016 first-year player draft (Round 3, Pick 23, 72nd overall pick). | | Drafted SP Randy Thrasher in the 2016 first-year player draft (Round 4, Pick 23, 96th overall pick). | | Drafted SP Tesema Kibwana in the 2016 first-year player draft (Round 5, Pick 23, 120th overall pick). | | Drafted SP Masamune Hayashi in the 2016 first-year player draft (Round 6, Pick 23, 144th overall pick). | | Drafted SP Joe Taylor in the 2016 first-year player draft (Round 7, Pick 23, 168th overall pick). | | Drafted LF Lester Thornton in the 2016 first-year player draft (Round 8, Pick 23, 192nd overall pick). | | Drafted SP Dana Ball in the 2016 first-year player draft (Round 9, Pick 23, 216th overall pick). | | Drafted RF Tony Harper in the 2016 first-year player draft (Round 10, Pick 23, 240th overall pick). | | Drafted SP Bill Dillard in the 2016 first-year player draft (Round 11, Pick 23, 264th overall pick). | | Drafted C Eric Case in the 2016 first-year player draft (Round 12, Pick 23, 288th overall pick). |
| Friday, November 4th, 2016 |
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| Team Trainer Bradley Boyd leaves the team, his contract was not renewed. |
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