| | | Tuesday, December 17th, 2013 | | Drafted 2B John Brooks in the 2013 first-year player draft (Round 1, Pick 9, 9th overall pick). | | Drafted SS Tom Tomlinson in the 2013 first-year player draft (Round 2, Pick 9, 34th overall pick). | | Drafted RF Floyd Cross in the 2013 first-year player draft (Round 3, Pick 9, 58th overall pick). | | Drafted SP Denis Philippe in the 2013 first-year player draft (Round 4, Pick 9, 82nd overall pick). | | Drafted CF Shun Ushiyama in the 2013 first-year player draft (Round 5, Pick 9, 106th overall pick). | | Drafted SP Bernard Martins in the 2013 first-year player draft (Round 6, Pick 9, 130th overall pick). | | Drafted LF John Porter in the 2013 first-year player draft (Round 7, Pick 9, 154th overall pick). | | Drafted LF Senichi Yoshikawa in the 2013 first-year player draft (Round 8, Pick 9, 178th overall pick). | | Drafted 3B Todd Harvey in the 2013 first-year player draft (Round 9, Pick 9, 202nd overall pick). | | Drafted C Kazuyuki Suzuki in the 2013 first-year player draft (Round 10, Pick 9, 226th overall pick). | | Drafted 1B Raúl Padilla in the 2013 first-year player draft (Round 11, Pick 9, 250th overall pick). | | Drafted C Edmund Moore in the 2013 first-year player draft (Round 12, Pick 9, 274th overall pick). | | Promoted LF Josuke Sato from Single A Whitewater to Double A Lake of the Isles. | | Demoted SS Kevin Gibson from Double A Lake of the Isles to Single A Whitewater. | | Released MR Tommy Smith. |
| Sunday, December 8th, 2013 | | Signed free agent LF Pedro Flores to a 2-year contract worth a total of $1,700,000. | | Signed free agent CF Vincent Bordes to a minor league contract. |
| Thursday, November 21st, 2013 | | 1B Peter Blanchard received a 1-year contract through automatic renewal worth a total of $510,000. | | SS Chip Render received a 1-year contract through automatic renewal worth a total of $510,000. | | SP Jack Hughes received a 1-year contract through automatic renewal worth a total of $500,000. | | SP Franklin Cox received a 1-year contract through automatic renewal worth a total of $500,000. | | 2B Ramón Salas received a 1-year contract through automatic renewal worth a total of $500,000. | | CF Matt Smith received a 1-year contract through automatic renewal worth a total of $510,000. | | SP Chris Wine received a 1-year contract through automatic renewal worth a total of $500,000. | | 3B Félix Longoria becomes a free-agent. | | RF Zach Milford becomes a free-agent. | | SP Jim Caldwell received a 1-year contract through automatic renewal worth a total of $510,000. | | MR Jim Davis received a 1-year contract through arbitration worth a total of $4,725,000. | | RF Bobby Lawson becomes a free-agent. | | MR Jared Vaughn becomes a free-agent. | | Promoted RF James Clark from Double A Lake of the Isles to Triple A Mdewanketon. | | Promoted SP Travis Coleman from Single A Whitewater to Double A Lake of the Isles. | | Promoted LF Josuke Sato from Single A Whitewater to Double A Lake of the Isles. |
| Monday, November 18th, 2013 | | SS Michael Davis received a 1-year contract through arbitration worth a total of $750,000. | | MR John Watts received a 1-year contract through arbitration worth a total of $750,000. | | C Juan Carlos Carrillo received a 1-year contract through arbitration worth a total of $750,000. |
| Tuesday, November 12th, 2013 | | Signed free agent MR Jesús Pérez to a minor league contract. |
| Wednesday, November 6th, 2013 | | Signed 3B Bryan Gardner to a 4-year contract extension worth a total of $25,000,000. |
| Friday, November 1st, 2013 | | Signed C Juan Rodríguez to a 3-year contract extension worth a total of $2,850,000. | | Signed CL Roy Cole to a 5-year contract extension worth a total of $28,750,000. | | Signed RF Rich Fraser to a 3-year contract extension worth a total of $9,000,000. |
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